All software

Connected drug discovery

X-DDE

From research material
to the next discovery.

Connect targets, structures, pockets and candidates. Explore small molecules, biologics, screening and DEL with guided tasks and 2D / 3D workspaces.

Open source · Apache-2.0 · v0.4.52
X-DDE — AI-generated concept artAI-generated concept art
Who it is for

Medicinal chemists, biologics researchers and computational scientists

Environment

Windows / Linux / WSL; scientific engines have separate installations

First-party source license

Apache-2.0

CAPABILITIES

Made for the work you do

01

Prepare tasks by research question, choose models and inspect outputs

02

Connect structures, molecular tables, sequences and 2D / 3D results

03

Work across small molecules, biologics, high-throughput screening and DEL

04

Preserve original material, derived versions and task provenance

Actual X-DDE v0.4.49 interface: structures and pockets from the public BRD4–JQ1 research example.View the full screenshot
Actual X-DDE v0.4.49 interface: structures and pockets from the public BRD4–JQ1 research example. Image source & context

YOUR FIRST WORKFLOW

A place to begin

  1. 01

    Prepare targets and structures

  2. 02

    Run a research task

  3. 03

    Compare candidates and results

Explore the documentation

Before you choose

Execution depends on the selected scientific engine, models, inputs and hardware. Model confidence, geometry, docking scores and measured activity have distinct meanings.

Based on public repository material, reviewed on 2026-10-08. README

A closer look

Open original image